igvCenter: Visualisation of transcription factor binding sites

The Integrative Genomics Viewer (IGV) is a high-performance visualisation tool for interactive exploration of large, integrated datasets. It supports a wide variety of data types including sequence alignments, microarrays, and genomic annotations.

IGVcenter Screenshot

As part of a student project we developed IGVcenter: A tiny graphical frontend for preparing ChIP-Seq data for use within IGV. Once the data is prepared, IGV can be started in a default views, which are customised together with biologists to meet their individual data analysis needs.

Please contact us, if you are interested in using this tool or in getting IGV customised for your experimental data: Andreas(dot)Dominik(at)mni(dot)fh-giessen(dot)de

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